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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015823858.1_cds_XP_016501659.1_15370
CDS Infomation

[gene=LOC107819977] [db_xref=GeneID:107819977] [protein=LOW QUALITY PROTEIN: ATP-dependent DNA helicase Q-like 5] [exception=unclassified translation discrepancy] [protein_id=XP_016501659.1] [location=complement(join(19640..19748,20324..20439,20518..20542,20856..21025,22156..22284,23369..23471,23563..23618,23883..23981,24639..24768,24857..24951,25040..25084,25512..25565,25673..25747,25864..25917,26027..26105,26662..26874,27003..27112,27752..27805,27892..28092,28094..29122))] [gbkey=CDS]
Sequence

ATGGATTCCGACTCCGATTCCGATGGCTCTCACATATCCTCAACCCCACCACGCCACCCT
CCTCCTCCGTCGCCGTTGCCGTCGCGCCGTGCTCTCCTTTCTACCGCAAAGTCAAGAACT
CAAGCCAAATACACCTCTATAACATCCACAAAATCTTCCCGCCCAATTCTAAGACCAAAA
CCCTCAACCAAACAACCCAAAAAAAATCCTCCTTCCAATCCTAAAACCCTAGAAAACCCA
ATTCAAAACCCACAAAATCCCTACAGTTCACCCTTCCAAATTCATAAAAACGACACCGTT
TCAAGTGAAGTTCTTCCAAATTTAACGAAAAATGCTTCCTGTTCGAAACCCCTAATTCAA
AATCCACTTTCCCCACCAAAATTCTCCGATTTACCCTTCCAAATCCACCGTAACGACACC
CTTTTGTCCAATGACAACAGTTCTGGTGAAGTTCTTCCTGCTGGAGGCTTGTGCTTATCC
AAATTTGCTTCCTTTTCGAAAACCCGAAAAGCCATTCTCAATCTTGAGCCTGCTGAAGCT
GATTCTATTGAACCCCGACTGGCTCAACAGACTGAAAAGAAGGAAGCAGTTGTCAGGAAA
CATCCTAATTTAATAGGGAGCAACGTGTCATCTTCGTTGCCTGCAAAGAAGGTTAAATGT
GTTAATGAGGGTAACTTTGTAAGGCTCAACATAAATGGTTATGGTAAAAAGTTTGCATCA
AAATTCAAAAGAAGGAATTCTAATTCATCAAGTGGTAAAAAGTTCTATAGAAGATGGAAA
AAGAAAGTTGGGGTTGTAGGTAAGGAAGGGGAAGGGGGGAATGGTTTGTGCGATGAAGAA
GGTTTAGTTGTGGAAGTTAAGGGAAGAGGAGGGGAAAGGATGGATTTTGATGCAAAGTTG
ATTGAAGATGCTGTGATGAGAGTTAGAAATGAGGCGTTGGATGAGAATTTGTTGAGGTTG
TTAAAACTGACTTTTGGTTATGATTCATTTAGAGATGGCCAGTTGGAGACAATCAAGATG
GTGCTTTCAGAGACAATCAAGATGGTGCTTTCGGGGAAATCTACAATGTTGGTTTTGCCA
ACGGGTGCTGGGAAGTCGCTGTGTTATCAGTTGCCGGCAATGGTTTTTCAGGGAGTTACA
GTTGTTATTAGCCCTTTGATTTCTTTAATGATTGATCAGCTAAAGCAGCTGCCTGCTGCT
GTGGAGGGTGGTCTTTTGTGTAGCAGCCAGACACCTGAGGAGGTTTTGGAAACTTATAAG
TTACTAGAAGAGGGATCCATAAAGGTCCTTTTTGTTTCACCAGAGAGGTTTCTCAATTCA
GAATTTTTATCCATTTTTTGTGACACTCAAATTTCACTTGTGGTTATTGATGAAGCCCAC
TGTGTTTCTGAATGGTCACACAACTTTCGGCCTTCGTATATGCGGCTTAAAGCATCATTA
CTGCGTGATAGACTCAAGGCTCAATGCATACTTGCAATGACAGCAACAGCAACTACTAAA
ACATTGTATAGTGTGATGCATGCATTGGATATTCCATCAAGTAATCTTATCCAAGCAGTG
AAACCAAGGGATAATTTGCAATTGTCAGTATCTCTGAGCGAAAACAGGATGAAAGATCTG
ATGACCTTGCTGAAGACTTCCCCCTTTTCAGAGGCTAAAAGCATCATCATTTACTGCAAA
TTTCAGTTCGAAACTGATCTCATTTGCAAATATCTATGTGACAGTAATATCTCGGCAAAG
AGTTATCACAGTGGAATTTTCGCAAAGGAAAGGAGCCGTACGCAGGAACTGTTTTGTGCA
AACAAGATAAGAGTGGTTGTTGCAACTGTGGCATTCGGCATGGGACTGAATAAGAAGGAT
ATTGAAGCTGTAATACATTACAGCTTACCAGAAAGCTTGGAAGAGTATGTCCAGGAGATT
GGTCGTGCTGGACGTGATGGTAGAATCTCTTATTGCCATCTCTTTTTTGATGATGTTTCC
TATTTTAAGACTCGCAGTCTTATGTACAGTGATGGTGTCGACGAGTATGTGGTGAACAAA
TTGCTGTGTCAAATTTTCAGTGACAGCACGAACTCTGCTGGGAAAATATGTTCATTAGTT
AAAGAGTCTGCTAGTCGTAAATTTGATATGAAAGAAGAGGTTATACTAACGATCTTAACA
CAATTGGAGCTAGGCGAGGTCCAATACTTGCACCTACTCCCACAGATGAGTGTAACATGC
ACGTTAAACTTTCATCAGACTTTCCCTGCATTGCTAGCTATGAAAGATGCTGTGGTTGCT
GCTATCTTGAAGAACTCTGAGATCAAAGATGGGCAGTATATATTTGACATACCAAGTGTA
GCAAACAGCACCAGACTGCAAGTCAATGACTTGTCAAACCATTTGCAAACACTGAAGTTG
AAGGGGGAAGTTACATATGAGCTGAAGGATCAGGCTTATTGTTATGTTATCATGGAAGTC
CCAAAGGATATCTGTTCTTTAGCAACATGGCTTACAAAGTGGTTATCTGAGGTTGAGAGT
TGTAAGGTAAGGAAGATGGACACGATGTACGATGCTGCTGTATTTGCAGCAGAAGCATGT
GACAAGGTGCATGGTTGCCTTGGCCGTCAACACACACCTTGCTTGCAAAGGAAAATTGCA
GAGTATTTTATAAGTGGTACTGAAGTTGACGTTCCAAAGAAGATTGGTGGAAGCAGCCCA
TTTTTGACAGCTGATATAAAGGTATTCCTACAGTGCAACTCACATGCCAAGTTTACTCCT
AGAGCTATCACAAGGATATTGCATGGCATTGCGAGCCCAGCATTCCCGTCTGCTACGTGG
TCGAGAACTCACTTCTGGGGAAGGTATATGCAAACAGACTTCAAAGCAATAACGGTAGCA
GCAAAGGCAGAGCTCATGAATCTTGTGGGGAAGGATTCTATTAAGCAAGGTCATTCCCAG
GATTGA

Peptide Sequence

PEP ID

XP_016501659.1
PEP Infomation

PREDICTED: LOW QUALITY PROTEIN: ATP-dependent DNA helicase Q-like 5 [Nicotiana tabacum]
Sequence

MDSDSDSDGSHISSTPPRHPPPPSPLPSRRALLSTAKSRTQAKYTSITSTKSSRPILRPK
PSTKQPKKNPPSNPKTLENPIQNPQNPYSSPFQIHKNDTVSSEVLPNLTKNASCSKPLIQ
NPLSPPKFSDLPFQIHRNDTLLSNDNSSGEVLPAGGLCLSKFASFSKTRKAILNLEPAEA
DSIEPRLAQQTEKKEAVVRKHPNLIGSNVSSSLPAKKVKCVNEGNFVRLNINGYGKKFAS
KFKRRNSNSSSGKKFYRRWKKKVGVVGKEGEGGNGLCDEEGLVVEVKGRGGERMDFDAKL
IEDAVMRVRNEALDENLLRLLKLTFGYDSFRDGQLETIKMVLSETIKMVLSGKSTMLVLP
TGAGKSLCYQLPAMVFQGVTVVISPLISLMIDQLKQLPAAVEGGLLCSSQTPEEVLETYK
LLEEGSIKVLFVSPERFLNSEFLSIFCDTQISLVVIDEAHCVSEWSHNFRPSYMRLKASL
LRDRLKAQCILAMTATATTKTLYSVMHALDIPSSNLIQAVKPRDNLQLSVSLSENRMKDL
MTLLKTSPFSEAKSIIIYCKFQFETDLICKYLCDSNISAKSYHSGIFAKERSRTQELFCA
NKIRVVVATVAFGMGLNKKDIEAVIHYSLPESLEEYVQEIGRAGRDGRISYCHLFFDDVS
YFKTRSLMYSDGVDEYVVNKLLCQIFSDSTNSAGKICSLVKESASRKFDMKEEVILTILT
QLELGEVQYLHLLPQMSVTCTLNFHQTFPALLAMKDAVVAAILKNSEIKDGQYIFDIPSV
ANSTRLQVNDLSNHLQTLKLKGEVTYELKDQAYCYVIMEVPKDICSLATWLTKWLSEVES
CKVRKMDTMYDAAVFAAEACDKVHGCLGRQHTPCLQRKIAEYFISGTEVDVPKKIGGSSP
FLTADIKVFLQCNSHAKFTPRAITRILHGIASPAFPSATWSRTHFWGRYMQTDFKAITVA
AKAELMNLVGKDSIKQGHSQD

Transcript Sequence

Gene sequence data has not been registered.